From your list, Matt and I have at least the following:
Dragon's Lair (NES)
Noah's Ark (NTSC)
Pac-Man (NES, Tengen Version)
Super Glove Ball
Teenage Mutant Ninja Turtles
and we have a Super Mario Bros./ Duck Hunt/ World Class Track Meet proto if that means anything.
I think there are confirmed protos of pretty much everything on your list though. Is that all you wanted to know?
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Hi, my name is Mark, and I collect (and now sell!) Prototypes.