Those are a much more recent development, but the outer boxes do have a similar quality about them. ^ I see those particular clone controllers EVERYWHERE.
Having owned a few of the ones you pictured, I can safely say that they are inferior to the ones packed with the system for two main reasons.
1. The controllers in the box w/ the system have a noticeably more gentle B A X Y push resistance than the controllers you pictures, where you practically need a megaton right thumb to push so much as "B."
2. The D-pads of the clone controllers boxed with the system have a rigid semicircle/hemisphere below the center of them. The ones you pictured don't, which can result in pushing opposite directions at the same time (and even all four directions at once, if you push the whole D-pad like a giant button.)
Here's my "killer the dog" theory- the company started off years ago making the SNES jr. systems in my original post. They may not have made much profit off of them due to the fairly extensive collection of goods in one place and the variety of manufacturing processes involved. After their first adventure in pirating, they just said "F--- it" and re-tooled their controller manufacturing facility to make a tidal wave of clone controllers at a very cheap price and flooded the market with them, making much more of a profit for a number of reasons.
Hell, the first time I bought those "light on the right" clone controllers you pictured I was duped by a salesman at a game store.
"are those new?"
"yes"
"why are they so cheap?"
*salesperson shrugs*
"They're probably fake..."
"Nuh-UHHHHH!!!! look look!! even got the seal of quality dude, this is Nintendo brand!"
"Okay, well in that case I'll take two!"
I went home, opened them up, went "... THE hell is this garbage?" Shook my fist at the sky, cursed the unknowledgeable salseman, cursed my own stupidity, then cursed when I checked eBay and saw that you almost can't even give them away.
Played a few games with one of 'em, then threw them in the garbage.
Ah, memories. I'm getting a bit out there now, so I'll shaddap'.
Lock thread please mods? It's OVER, for a spifftastic $25 shipped.